bioDBnet - Biological Database Network

bioDBnet: Web Services: SOAP - Sample Code

Sample code for bioDBnet SOAP APIs

Sample code in different languagues is provided. If you would like to share your code with other bioDBnet users, please contact us.

PHP:


$wsdl = "https://biodbnet-abcc.ncifcrf.gov/webServices/bioDBnet.wsdl";

$client = new SoapClient($wsdl);

$inputs = $client->getInputs();
print $inputs;

$input = "Gene Symbol";
$outputs = $client->getOutputsForInput($input);
print $outputs;

$dirOutputs = $client->getDirectOutputsForInput($input);
print $dirOutputs;

$db2dbParams['input'] = $input;
$db2dbParams['outputs'] = "Gene ID, Ensembl Gene ID";
$db2dbParams['inputValues'] = "MYC,A1BG";
$db2dbParams['taxonId'] = "9606";

$db2dbRes = $client->db2db($db2dbParams);
print $db2dbRes;

Python:

import SOAPpy
from SOAPpy import WSDL

biodbnet = WSDL.Proxy('https://biodbnet-abcc.ncifcrf.gov/webServices/bioDBnet.wsdl')

input = 'Gene Symbol'
inputValues = 'MYC, CPT1A'
output = 'Gene ID'
outputs = 'Gene Symbol, Ensembl Protein ID'
taxonId = '9606'

inputResult = biodbnet.getInputs()
print inputResult

outputResult = biodbnet.getOutputsForInput(input)
print outputResult

directOutputResult = biodbnet.getDirectOutputsForInput(input)
print directOutputResult

db2dbParams = SOAPpy.structType({'input': input, 'inputValues': inputValues, 'outputs': outputs, 'taxonId': taxonId})
db2dbResult = biodbnet.db2db(db2dbParams)
print db2dbResult